HL_7K50_029

3D structure

PDB id

7K50 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre-translocation non-frameshifting(CCA-A) complex (Structure I)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GCUUAUGC

Length

8 nucleotides

Bulged bases

7K50|1|1|A|1175

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7K50_029 not in the Motif Atlas

Geometric match to HL_8C3A_022

Geometric discrepancy: 0.2843

The information below is about HL_8C3A_022

Detailed Annotation

Externally structured

Broad Annotation

Externally structured

Motif group

HL_96426.1

Basepair signature

cWW-F

Number of instances in this motif group

4

Unit IDs

7K50|1|1|G|1171
7K50|1|1|C|1172
7K50|1|1|U|1173
7K50|1|1|U|1174
7K50|1|1|A|1175
7K50|1|1|U|1176
7K50|1|1|G|1177
7K50|1|1|C|1178

Current chains

Chain 1

23S ribosomal RNA

Nearby chains