HL_7KGB_099

3D structure

PDB id

7KGB (explore in PDB, NAKB, or RNA 3D Hub)

Description

CryoEM structure of A2296-methylated Mycobacterium tuberculosis ribosome bound with SEQ-9

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GUUAAGUC

Length

8 nucleotides

Bulged bases

7KGB|1|a|G|1085

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7KGB_099 not in the Motif Atlas

Homologous match to HL_4LFB_025

Geometric discrepancy: 0.1074

The information below is about HL_4LFB_025

Detailed Annotation

T-loop related

Broad Annotation

T-loop

Motif group

HL_63894.3

Basepair signature

cWW-cWW-F-F-F

Number of instances in this motif group

22

Unit IDs

7KGB|1|a|G|1080
7KGB|1|a|U|1081
7KGB|1|a|U|1082
7KGB|1|a|A|1083
7KGB|1|a|A|1084
7KGB|1|a|G|1085
7KGB|1|a|U|1086
7KGB|1|a|C|1087

Current chains

Chain a

16S rRNA

Nearby chains

Chain g

30S ribosomal protein S7