HL_7KGB_104
3D structure
- PDB id
- 7KGB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CryoEM structure of A2296-methylated Mycobacterium tuberculosis ribosome bound with SEQ-9
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- GAUCAGCAACGC
- Length
- 12 nucleotides
- Bulged bases
- 7KGB|1|a|A|1356, 7KGB|1|a|C|1357
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7KGB_104 not in the Motif Atlas
- Homologous match to HL_5J7L_029
- Geometric discrepancy: 0.1574
- The information below is about HL_5J7L_029
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_06226.4
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
7KGB|1|a|G|1348
7KGB|1|a|A|1349
7KGB|1|a|U|1350
7KGB|1|a|C|1351
7KGB|1|a|A|1352
7KGB|1|a|G|1353
7KGB|1|a|C|1354
7KGB|1|a|A|1355
7KGB|1|a|A|1356
7KGB|1|a|C|1357
7KGB|1|a|G|1358
7KGB|1|a|C|1359
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain i
- 30S ribosomal protein S9
- Chain j
- 30S ribosomal protein S10
- Chain n
- 30S ribosomal protein S14 type Z
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