HL_7LH5_119
3D structure
- PDB id
- 7LH5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with plazomicin, mRNA and tRNAs
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.27 Å
Loop
- Sequence
- GAUUAGAUACC
- Length
- 11 nucleotides
- Bulged bases
- 7LH5|1|CA|U|793
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7LH5_119 not in the Motif Atlas
- Homologous match to HL_4LFB_017
- Geometric discrepancy: 0.0887
- The information below is about HL_4LFB_017
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_38491.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 11
Unit IDs
7LH5|1|CA|G|786
7LH5|1|CA|A|787
7LH5|1|CA|U|788
7LH5|1|CA|U|789
7LH5|1|CA|A|790
7LH5|1|CA|G|791
7LH5|1|CA|A|792
7LH5|1|CA|U|793
7LH5|1|CA|A|794
7LH5|1|CA|C|795
7LH5|1|CA|C|796
Current chains
- Chain CA
- 16S ribosomal RNA
Nearby chains
- Chain CK
- 30S ribosomal protein S11
- Chain CV
- Transfer RNA; tRNA
- Chain CW
- Transfer RNA; tRNA
- Chain CX
- mRNA
- Chain DA
- Large subunit ribosomal RNA; LSU rRNA
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