HL_7M4W_084

3D structure

PDB id

7M4W (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-Eravacycline complex: 70S Empty

Experimental method

ELECTRON MICROSCOPY

Resolution

2.55 Å

Loop

Sequence

CGGUGAAAUG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7M4W_084 not in the Motif Atlas

Homologous match to HL_4LFB_015

Geometric discrepancy: 0.1041

The information below is about HL_4LFB_015

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_38491.1

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

11

Unit IDs

7M4W|1|a|C|686
7M4W|1|a|G|687
7M4W|1|a|G|688
7M4W|1|a|U|689
7M4W|1|a|G|690
7M4W|1|a|A|691
7M4W|1|a|A|692
7M4W|1|a|A|693
7M4W|1|a|U|694
7M4W|1|a|G|695

Current chains

Chain a

16s Ribosomal RNA

Nearby chains

Chain k

30S ribosomal protein S11

Chain u

30S ribosomal protein S21