HL_7M4Z_022

3D structure

PDB id

7M4Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-Eravacycline complex: 70S with hpf

Experimental method

ELECTRON MICROSCOPY

Resolution

2.92 Å

Loop

Sequence

CGUUGAAAAG

Length

10 nucleotides

Bulged bases

7M4Z|1|A|U|745, 7M4Z|1|A|A|749, 7M4Z|1|A|A|750

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7M4Z_022 not in the Motif Atlas

Homologous match to HL_4WF9_023

Geometric discrepancy: 0.1457

The information below is about HL_4WF9_023

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_50204.1

Basepair signature

cWW-cWS-tSW-F-F

Number of instances in this motif group

11

Unit IDs

7M4Z|1|A|C|742
7M4Z|1|A|G|743
7M4Z|1|A|U|744
7M4Z|1|A|U|745
7M4Z|1|A|G|746
7M4Z|1|A|A|747
7M4Z|1|A|A|748
7M4Z|1|A|A|749
7M4Z|1|A|A|750
7M4Z|1|A|G|751

Current chains

Chain A

23s ribosomal RNA

Nearby chains

Chain 1

50S ribosomal protein L34

Chain D

50S ribosomal protein L3

Chain R

50S ribosomal protein L22

Chain Z

50S ribosomal protein L32