HL_7M4Z_041

3D structure

PDB id

7M4Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-Eravacycline complex: 70S with hpf

Experimental method

ELECTRON MICROSCOPY

Resolution

2.92 Å

Loop

Sequence

ACUCGCU

Length

7 nucleotides

Bulged bases

7M4Z|1|A|U|1725, 7M4Z|1|A|C|1728

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7M4Z_041 not in the Motif Atlas

Geometric match to HL_8C3A_039

Geometric discrepancy: 0.3992

The information below is about HL_8C3A_039

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_71121.1

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

7M4Z|1|A|A|1723
7M4Z|1|A|C|1724
7M4Z|1|A|U|1725
7M4Z|1|A|C|1726
7M4Z|1|A|G|1727
7M4Z|1|A|C|1728
7M4Z|1|A|U|1729

Current chains

Chain A

23s ribosomal RNA

Nearby chains