HL_7M4Z_057

3D structure

PDB id

7M4Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-Eravacycline complex: 70S with hpf

Experimental method

ELECTRON MICROSCOPY

Resolution

2.92 Å

Loop

Sequence

UGUAUGGAAG

Length

10 nucleotides

Bulged bases

7M4Z|1|A|U|2402

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7M4Z_057 not in the Motif Atlas

Homologous match to HL_5J7L_192

Geometric discrepancy: 0.1093

The information below is about HL_5J7L_192

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_53454.2

Basepair signature

cWW-tSH-F-F-F-F-F

Number of instances in this motif group

6

Unit IDs

7M4Z|1|A|U|2400
7M4Z|1|A|G|2401
7M4Z|1|A|U|2402
7M4Z|1|A|A|2403
7M4Z|1|A|U|2404
7M4Z|1|A|G|2405
7M4Z|1|A|G|2406
7M4Z|1|A|A|2407
7M4Z|1|A|A|2408
7M4Z|1|A|G|2409

Current chains

Chain A

23s ribosomal RNA

Nearby chains

Chain K

50S ribosomal protein L15