HL_7M4Z_060

3D structure

PDB id

7M4Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-Eravacycline complex: 70S with hpf

Experimental method

ELECTRON MICROSCOPY

Resolution

2.92 Å

Loop

Sequence

C(OMU)GUUCG

Length

7 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: OMU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7M4Z_060 not in the Motif Atlas

Homologous match to HL_5J7L_195

Geometric discrepancy: 0.1536

The information below is about HL_5J7L_195

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_30068.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

15

Unit IDs

7M4Z|1|A|C|2547
7M4Z|1|A|OMU|2548
7M4Z|1|A|G|2549
7M4Z|1|A|U|2550
7M4Z|1|A|U|2551
7M4Z|1|A|C|2552
7M4Z|1|A|G|2553

Current chains

Chain A

23s ribosomal RNA

Nearby chains