HL_7M4Z_080

3D structure

PDB id

7M4Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-Eravacycline complex: 70S with hpf

Experimental method

ELECTRON MICROSCOPY

Resolution

2.92 Å

Loop

Sequence

CUUAUG

Length

6 nucleotides

Bulged bases

7M4Z|1|a|U|417

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7M4Z_080 not in the Motif Atlas

Geometric match to HL_5TBW_018

Geometric discrepancy: 0.2458

The information below is about HL_5TBW_018

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_84570.1

Basepair signature

cWW-cWW-F

Number of instances in this motif group

6

Unit IDs

7M4Z|1|a|C|415
7M4Z|1|a|U|416
7M4Z|1|a|U|417
7M4Z|1|a|A|418
7M4Z|1|a|U|419
7M4Z|1|a|G|420

Current chains

Chain a

16s Ribosomal RNA

Nearby chains

Chain c

30S ribosomal protein S3

Chain d

30S ribosomal protein S4