HL_7M4Z_090
3D structure
- PDB id
- 7M4Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- A. baumannii Ribosome-Eravacycline complex: 70S with hpf
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.92 Å
Loop
- Sequence
- GAU(2MG)(5MC)AACGC
- Length
- 10 nucleotides
- Bulged bases
- 7M4Z|1|a|A|965, 7M4Z|1|a|G|968
- QA status
- Modified nucleotides: 2MG, 5MC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7M4Z_090 not in the Motif Atlas
- Homologous match to HL_4LFB_021
- Geometric discrepancy: 0.1064
- The information below is about HL_4LFB_021
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50779.4
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
7M4Z|1|a|G|960
7M4Z|1|a|A|961
7M4Z|1|a|U|962
7M4Z|1|a|2MG|963
7M4Z|1|a|5MC|964
7M4Z|1|a|A|965
7M4Z|1|a|A|966
7M4Z|1|a|C|967
7M4Z|1|a|G|968
7M4Z|1|a|C|969
Current chains
- Chain a
- 16s Ribosomal RNA
Nearby chains
- Chain i
- 30S ribosomal protein S9
- Chain j
- 30S ribosomal protein S10
- Chain m
- 30S ribosomal protein S13
- Chain v
- Ribosomal subunit interface protein
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