HL_7M4Z_104

3D structure

PDB id

7M4Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-Eravacycline complex: 70S with hpf

Experimental method

ELECTRON MICROSCOPY

Resolution

2.92 Å

Loop

Sequence

GUCGGAAAU

Length

9 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7M4Z_104 not in the Motif Atlas

Homologous match to HL_5J7L_219

Geometric discrepancy: 0.4356

The information below is about HL_5J7L_219

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_50860.2

Basepair signature

cWW-F-cWH-F-F-F-F

Number of instances in this motif group

6

Unit IDs

7M4Z|1|A|G|2300
7M4Z|1|A|U|2301
7M4Z|1|A|C|2302
7M4Z|1|A|G|2303
7M4Z|1|A|G|2304
7M4Z|1|A|A|2305
7M4Z|1|A|A|2306
7M4Z|1|A|A|2307
7M4Z|1|A|U|2308

Current chains

Chain A

23s ribosomal RNA

Nearby chains

Chain F

50S ribosomal protein L5