HL_7MPJ_021
3D structure
- PDB id
- 7MPJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Stm1 bound vacant 80S structure isolated from nop1-D243A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- GCGAAAGAC
- Length
- 9 nucleotides
- Bulged bases
- 7MPJ|1|A1|A|913, 7MPJ|1|A1|G|916
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7MPJ_021 not in the Motif Atlas
- Homologous match to HL_8C3A_021
- Geometric discrepancy: 0.1367
- The information below is about HL_8C3A_021
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_56443.1
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
7MPJ|1|A1|G|910
7MPJ|1|A1|C|911
7MPJ|1|A1|G|912
7MPJ|1|A1|A|913
7MPJ|1|A1|A|914
7MPJ|1|A1|A|915
7MPJ|1|A1|G|916
7MPJ|1|A1|A|917
7MPJ|1|A1|C|918
Current chains
- Chain A1
- 25S rRNA
Nearby chains
- Chain AA
- 60S ribosomal protein L2-A
- Chain AN
- 60S ribosomal protein L15-A
- Chain Aj
- 60S ribosomal protein L37-A
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