3D structure

PDB id
8C3A (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of ailanthone bound to the Candida albicans 80S ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3 Å

Loop

Sequence
GCGAAAGAC
Length
9 nucleotides
Bulged bases (A, C, G, U)
909A
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_33817.1
Basepair signature
cWW-cWW-tSW-F-F
Number of instances in this motif group
2

Unit IDs

8C3A|1|1|G|906
8C3A|1|1|C|907
8C3A|1|1|G|908
8C3A|1|1|A|909
8C3A|1|1|A|910
8C3A|1|1|A|911
8C3A|1|1|G|912
8C3A|1|1|A|913
8C3A|1|1|C|914

Current chains

Chain 1
25S

Nearby chains

Chain AK
60S ribosomal protein L37-B
Chain j
60S ribosomal protein L2-B
Chain v
60S ribosomal protein L15-A

Coloring options:

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