HL_7MQ9_014
3D structure
- PDB id
- 7MQ9 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the human SSU processome, state pre-A1*
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.87 Å
Loop
- Sequence
- CUUUCG
- Length
- 6 nucleotides
- Bulged bases
- 7MQ9|1|L1|U|541, 7MQ9|1|L1|U|542
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7MQ9_014 not in the Motif Atlas
- Homologous match to HL_4V88_198
- Geometric discrepancy: 0.5956
- The information below is about HL_4V88_198
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_71121.1
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 24
Unit IDs
7MQ9|1|L1|C|539
7MQ9|1|L1|U|540
7MQ9|1|L1|U|541
7MQ9|1|L1|U|542
7MQ9|1|L1|C|543
7MQ9|1|L1|G|544
Current chains
- Chain L1
- 18S rRNA
Nearby chains
- Chain NB
- Something about silencing protein 10
- Chain SI
- Ribosome biogenesis protein BMS1 homolog
- Chain SL
- rRNA-processing protein FCF1 homolog
- Chain SQ
- Deoxynucleotidyltransferase terminal-interacting protein 2
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