HL_7MQ9_017

3D structure

PDB id

7MQ9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human SSU processome, state pre-A1*

Experimental method

ELECTRON MICROSCOPY

Resolution

3.87 Å

Loop

Sequence

UCA

Length

3 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7MQ9_017 not in the Motif Atlas

Geometric match to HL_8H9D_001

Geometric discrepancy: 0.2845

The information below is about HL_8H9D_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_69752.1

Basepair signature

cWW-F

Number of instances in this motif group

8

Unit IDs

7MQ9|1|L1|U|686
7MQ9|1|L1|C|687
7MQ9|1|L1|A|916

Current chains

Chain L1

18S rRNA

Nearby chains

Chain L7

40S ribosomal protein S7

Chain NF

40S ribosomal protein S13

Chain NO

40S ribosomal protein S15a