HL_7MSH_068

3D structure

PDB id

7MSH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70SIC in complex with MtbEttA at Pre_R1 state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.23 Å

Loop

Sequence

CUGAAAGCAUCUAAG

Length

15 nucleotides

Bulged bases

7MSH|1|A|G|2989, 7MSH|1|A|C|2993

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7MSH_068 not in the Motif Atlas

Homologous match to HL_7RQB_066

Geometric discrepancy: 0.1442

The information below is about HL_7RQB_066

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_56677.7

Basepair signature

cWW-tWH-tSH-cWH-tSH-tHW-tHW-tSW

Number of instances in this motif group

8

Unit IDs

7MSH|1|A|C|2983
7MSH|1|A|U|2984
7MSH|1|A|G|2985
7MSH|1|A|A|2986
7MSH|1|A|A|2987
7MSH|1|A|A|2988
7MSH|1|A|G|2989
7MSH|1|A|C|2990
7MSH|1|A|A|2991
7MSH|1|A|U|2992
7MSH|1|A|C|2993
7MSH|1|A|U|2994
7MSH|1|A|A|2995
7MSH|1|A|A|2996
7MSH|1|A|G|2997

Current chains

Chain A

23S rRNA

Nearby chains

Chain 4

50S ribosomal protein L36

Chain G

50S ribosomal protein L6

Chain J

50S ribosomal protein L13