HL_7MSM_053

3D structure

PDB id

7MSM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70SIC in complex with MtbEttA at Trans_R0 state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.79 Å

Loop

Sequence

GUAAAGAUGC

Length

10 nucleotides

Bulged bases

7MSM|1|A|A|2268, 7MSM|1|A|A|2269, 7MSM|1|A|G|2270

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7MSM_053 not in the Motif Atlas

Homologous match to HL_7RQB_050

Geometric discrepancy: 0.1208

The information below is about HL_7RQB_050

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_90642.6

Basepair signature

cWW-tWH-F-F-F

Number of instances in this motif group

6

Unit IDs

7MSM|1|A|G|2265
7MSM|1|A|U|2266
7MSM|1|A|A|2267
7MSM|1|A|A|2268
7MSM|1|A|A|2269
7MSM|1|A|G|2270
7MSM|1|A|A|2271
7MSM|1|A|U|2272
7MSM|1|A|G|2273
7MSM|1|A|C|2274

Current chains

Chain A

23S rRNA

Nearby chains

Chain 0

50S ribosomal protein L32

Chain 7

50S ribosomal protein L37

Chain D

50S ribosomal protein L3