HL_7MSM_057

3D structure

PDB id

7MSM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70SIC in complex with MtbEttA at Trans_R0 state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.79 Å

Loop

Sequence

CUAAAAUGUAACG

Length

13 nucleotides

Bulged bases

7MSM|1|A|A|2506, 7MSM|1|A|C|2513

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7MSM_057 not in the Motif Atlas

Homologous match to HL_5J7L_187

Geometric discrepancy: 0.0864

The information below is about HL_5J7L_187

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91939.2

Basepair signature

cWW-tSH-tHH-tWW-F-F-F

Number of instances in this motif group

8

Unit IDs

7MSM|1|A|C|2502
7MSM|1|A|U|2503
7MSM|1|A|A|2504
7MSM|1|A|A|2505
7MSM|1|A|A|2506
7MSM|1|A|A|2507
7MSM|1|A|U|2508
7MSM|1|A|G|2509
7MSM|1|A|U|2510
7MSM|1|A|A|2511
7MSM|1|A|A|2512
7MSM|1|A|C|2513
7MSM|1|A|G|2514

Current chains

Chain A

23S rRNA

Nearby chains

Chain M

50S ribosomal protein L16

Chain W

50S ribosomal protein L27