HL_7MSM_098

3D structure

PDB id

7MSM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70SIC in complex with MtbEttA at Trans_R0 state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.79 Å

Loop

Sequence

GUUAAGUC

Length

8 nucleotides

Bulged bases

7MSM|1|a|G|1085

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7MSM_098 not in the Motif Atlas

Homologous match to HL_4LFB_025

Geometric discrepancy: 0.1218

The information below is about HL_4LFB_025

Detailed Annotation

T-loop related

Broad Annotation

T-loop

Motif group

HL_63894.2

Basepair signature

cWW-cWW-F-F-F

Number of instances in this motif group

19

Unit IDs

7MSM|1|a|G|1080
7MSM|1|a|U|1081
7MSM|1|a|U|1082
7MSM|1|a|A|1083
7MSM|1|a|A|1084
7MSM|1|a|G|1085
7MSM|1|a|U|1086
7MSM|1|a|C|1087

Current chains

Chain a

16S rRNA

Nearby chains

Chain g

30S ribosomal protein S7