HL_7MSM_107
3D structure
- PDB id
- 7MSM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mtb 70SIC in complex with MtbEttA at Trans_R0 state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.79 Å
Loop
- Sequence
- GCUCAUAAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7MSM_107 not in the Motif Atlas
- Homologous match to HL_5E81_212
- Geometric discrepancy: 0.0996
- The information below is about HL_5E81_212
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_06059.6
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 51
Unit IDs
7MSM|1|y|G|32
7MSM|1|y|C|33
7MSM|1|y|U|34
7MSM|1|y|C|35
7MSM|1|y|A|36
7MSM|1|y|U|37
7MSM|1|y|A|38
7MSM|1|y|A|39
7MSM|1|y|C|40
Current chains
- Chain y
- initiator tRNA (Met)
Nearby chains
- Chain a
- Small subunit ribosomal RNA; SSU rRNA
- Chain i
- 30S ribosomal protein S9
- Chain z
- mRNA
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