HL_7MSM_109
3D structure
- PDB id
- 7MSM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mtb 70SIC in complex with MtbEttA at Trans_R0 state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.79 Å
Loop
- Sequence
- UGGGAGGCUG
- Length
- 10 nucleotides
- Bulged bases
- 7MSM|1|A|G|60
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7MSM_109 not in the Motif Atlas
- Homologous match to HL_4WF9_067
- Geometric discrepancy: 0.4965
- The information below is about HL_4WF9_067
- Detailed Annotation
- Pseudoknot with intercalation
- Broad Annotation
- No text annotation
- Motif group
- HL_93438.2
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 6
Unit IDs
7MSM|1|A|U|59
7MSM|1|A|G|60
7MSM|1|A|G|61
7MSM|1|A|G|62
7MSM|1|A|A|63
7MSM|1|A|G|64
7MSM|1|A|G|65
7MSM|1|A|C|66
7MSM|1|A|U|67
7MSM|1|A|G|68
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 2
- 50S ribosomal protein L34
- Chain T
- 50S ribosomal protein L23
- Chain Y
- 50S ribosomal protein L29
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