HL_7MSM_115

3D structure

PDB id

7MSM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70SIC in complex with MtbEttA at Trans_R0 state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.79 Å

Loop

Sequence

GCCCGUGGAAU

Length

11 nucleotides

Bulged bases

7MSM|1|A|G|475

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7MSM_115 not in the Motif Atlas

Homologous match to HL_9DFE_012

Geometric discrepancy: 0.2586

The information below is about HL_9DFE_012

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91503.7

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

7MSM|1|A|G|471
7MSM|1|A|C|472
7MSM|1|A|C|473
7MSM|1|A|C|474
7MSM|1|A|G|475
7MSM|1|A|U|476
7MSM|1|A|G|477
7MSM|1|A|G|478
7MSM|1|A|A|479
7MSM|1|A|A|480
7MSM|1|A|U|481

Current chains

Chain A

23S rRNA

Nearby chains

Chain L

50S ribosomal protein L15

Chain X

50S ribosomal protein L28