HL_7MSM_118

3D structure

PDB id

7MSM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70SIC in complex with MtbEttA at Trans_R0 state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.79 Å

Loop

Sequence

GACGGCAAU

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7MSM_118 not in the Motif Atlas

Homologous match to HL_5J7L_219

Geometric discrepancy: 0.1284

The information below is about HL_5J7L_219

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_50860.2

Basepair signature

cWW-F-cWH-F-F-F-F

Number of instances in this motif group

6

Unit IDs

7MSM|1|A|G|2542
7MSM|1|A|A|2543
7MSM|1|A|C|2544
7MSM|1|A|G|2545
7MSM|1|A|G|2546
7MSM|1|A|C|2547
7MSM|1|A|A|2548
7MSM|1|A|A|2549
7MSM|1|A|U|2550

Current chains

Chain A

23S rRNA

Nearby chains

Chain F

50S ribosomal protein L5