HL_7MSZ_004

3D structure

PDB id

7MSZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70SIC in complex with MtbEttA at Trans_R1 state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UGAAUAUAUAG

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7MSZ_004 not in the Motif Atlas

Homologous match to HL_5J7L_138

Geometric discrepancy: 0.3443

The information below is about HL_5J7L_138

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_68257.1

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

2

Unit IDs

7MSZ|1|A|U|160
7MSZ|1|A|G|161
7MSZ|1|A|A|162
7MSZ|1|A|A|163
7MSZ|1|A|U|164
7MSZ|1|A|A|165
7MSZ|1|A|U|166
7MSZ|1|A|A|167
7MSZ|1|A|U|168
7MSZ|1|A|A|169
7MSZ|1|A|G|170

Current chains

Chain A

23S rRNA

Nearby chains

Chain X

50S ribosomal protein L28