HL_7MSZ_047

3D structure

PDB id

7MSZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70SIC in complex with MtbEttA at Trans_R1 state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UUUACUAAAAA

Length

11 nucleotides

Bulged bases

7MSZ|1|A|A|2014, 7MSZ|1|A|C|2015, 7MSZ|1|A|U|2016, 7MSZ|1|A|A|2020

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7MSZ_047 not in the Motif Atlas

Homologous match to HL_7RQB_045

Geometric discrepancy: 0.1145

The information below is about HL_7RQB_045

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_43613.5

Basepair signature

cWW-tWH-tWH-F

Number of instances in this motif group

6

Unit IDs

7MSZ|1|A|U|2011
7MSZ|1|A|U|2012
7MSZ|1|A|U|2013
7MSZ|1|A|A|2014
7MSZ|1|A|C|2015
7MSZ|1|A|U|2016
7MSZ|1|A|A|2017
7MSZ|1|A|A|2018
7MSZ|1|A|A|2019
7MSZ|1|A|A|2020
7MSZ|1|A|A|2021

Current chains

Chain A

23S rRNA

Nearby chains

Chain 2

50S ribosomal protein L34

Chain C

50S ribosomal protein L2