3D structure

PDB id
7N1P (explore in PDB, NAKB, or RNA 3D Hub)
Description
Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformation
Experimental method
ELECTRON MICROSCOPY
Resolution
2.33 Å

Loop

Sequence
UGAAUCCAUAG
Length
11 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7N1P_037 not in the Motif Atlas
Homologous match to HL_5J7L_138
Geometric discrepancy: 0.0892
The information below is about HL_5J7L_138
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_68257.1
Basepair signature
cWW-F-F-F-F-F-F-F-F
Number of instances in this motif group
2

Unit IDs

7N1P|1|23|U|158
7N1P|1|23|G|159
7N1P|1|23|A|160
7N1P|1|23|A|161
7N1P|1|23|U|162
7N1P|1|23|C|163
7N1P|1|23|C|164
7N1P|1|23|A|165
7N1P|1|23|U|166
7N1P|1|23|A|167
7N1P|1|23|G|168

Current chains

Chain 23
23S rRNA

Nearby chains

Chain Lb
50S ribosomal protein L28

Coloring options:


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