HL_7N1P_044

3D structure

PDB id

7N1P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.33 Å

Loop

Sequence

ACACGUGGUAU

Length

11 nucleotides

Bulged bases

7N1P|1|23|G|386, 7N1P|1|23|G|389

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7N1P_044 not in the Motif Atlas

Homologous match to HL_5J7L_145

Geometric discrepancy: 0.0816

The information below is about HL_5J7L_145

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91503.7

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

7N1P|1|23|A|382
7N1P|1|23|C|383
7N1P|1|23|A|384
7N1P|1|23|C|385
7N1P|1|23|G|386
7N1P|1|23|U|387
7N1P|1|23|G|388
7N1P|1|23|G|389
7N1P|1|23|U|390
7N1P|1|23|A|391
7N1P|1|23|U|392

Current chains

Chain 23

23S rRNA

Nearby chains

Chain Lb

50S ribosomal protein L28