HL_7N2C_005

3D structure

PDB id

7N2C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a fusidic acid-stalled intermediate state of translocation bound to EF-G(GDP) (INT2)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.72 Å

Loop

Sequence

GGACCUUCGGGC

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7N2C_005 not in the Motif Atlas

Geometric match to HL_8C3A_022

Geometric discrepancy: 0.289

The information below is about HL_8C3A_022

Detailed Annotation

Externally structured

Broad Annotation

Externally structured

Motif group

HL_96426.1

Basepair signature

cWW-F

Number of instances in this motif group

4

Unit IDs

7N2C|1|16|G|203
7N2C|1|16|G|204
7N2C|1|16|A|205
7N2C|1|16|C|206
7N2C|1|16|C|207
7N2C|1|16|U|208
7N2C|1|16|U|209
7N2C|1|16|C|210
7N2C|1|16|G|211
7N2C|1|16|G|212
7N2C|1|16|G|213
7N2C|1|16|C|214

Current chains

Chain 16

16S rRNA

Nearby chains