HL_7N2C_050

3D structure

PDB id

7N2C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a fusidic acid-stalled intermediate state of translocation bound to EF-G(GDP) (INT2)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.72 Å

Loop

Sequence

CGAAUAG

Length

7 nucleotides

Bulged bases

7N2C|1|23|U|615

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7N2C_050 not in the Motif Atlas

Geometric match to HL_3DIL_003

Geometric discrepancy: 0.2326

The information below is about HL_3DIL_003

Detailed Annotation

GNRA

Broad Annotation

GNRA

Motif group

HL_30068.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

15

Unit IDs

7N2C|1|23|C|611
7N2C|1|23|G|612
7N2C|1|23|A|613
7N2C|1|23|A|614
7N2C|1|23|U|615
7N2C|1|23|A|616
7N2C|1|23|G|617

Current chains

Chain 23

23S rRNA

Nearby chains

Chain LD

50S ribosomal protein L4