3D structure

PDB id
7N2C (explore in PDB, NAKB, or RNA 3D Hub)
Description
Elongating 70S ribosome complex in a fusidic acid-stalled intermediate state of translocation bound to EF-G(GDP) (INT2)
Experimental method
ELECTRON MICROSCOPY
Resolution
2.72 Å

Loop

Sequence
(PSU)GCUAACG
Length
8 nucleotides
Bulged bases
7N2C|1|23|U|958, 7N2C|1|23|C|961
QA status
Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7N2C_111 not in the Motif Atlas
Homologous match to HL_5J7L_211
Geometric discrepancy: 0.0981
The information below is about HL_5J7L_211
Detailed Annotation
GNRA
Broad Annotation
No text annotation
Motif group
HL_37824.8
Basepair signature
cWW-F-F-F-F
Number of instances in this motif group
352

Unit IDs

7N2C|1|23|PSU|955
7N2C|1|23|G|956
7N2C|1|23|C|957
7N2C|1|23|U|958
7N2C|1|23|A|959
7N2C|1|23|A|960
7N2C|1|23|C|961
7N2C|1|23|G|962

Current chains

Chain 23
23S rRNA

Nearby chains

Chain 5
5S ribosomal RNA; 5S rRNA
Chain LP
50S ribosomal protein L16

Coloring options:


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