HL_7N2C_116
3D structure
- PDB id
- 7N2C (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Elongating 70S ribosome complex in a fusidic acid-stalled intermediate state of translocation bound to EF-G(GDP) (INT2)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.72 Å
Loop
- Sequence
- A(PSU)UGAA(MIA)A(PSU)
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: PSU, MIA
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7N2C_116 not in the Motif Atlas
- Homologous match to HL_5J8B_118
- Geometric discrepancy: 0.1893
- The information below is about HL_5J8B_118
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_06059.4
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 54
Unit IDs
7N2C|1|Dt|A|31
7N2C|1|Dt|PSU|32
7N2C|1|Dt|U|33
7N2C|1|Dt|G|34
7N2C|1|Dt|A|35
7N2C|1|Dt|A|36
7N2C|1|Dt|MIA|37
7N2C|1|Dt|A|38
7N2C|1|Dt|PSU|39
Current chains
- Chain Dt
- tRNA
Nearby chains
- Chain 16
- Small subunit ribosomal RNA; SSU rRNA
- Chain Pt
- Transfer RNA; tRNA
- Chain SI
- 30S ribosomal protein S9
- Chain mR
- Chains: mR
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