HL_7N2V_054
3D structure
- PDB id
- 7N2V (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Elongating 70S ribosome complex in a spectinomycin-stalled intermediate state of translocation bound to EF-G in an active, GTP conformation (INT1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.54 Å
Loop
- Sequence
- U(1MG)(PSU)(5MU)GAAAAA
- Length
- 10 nucleotides
- Bulged bases
- 7N2V|1|23|A|751, 7N2V|1|23|A|752
- QA status
- Modified nucleotides: 1MG, PSU, 5MU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7N2V_054 not in the Motif Atlas
- Homologous match to HL_5J7L_155
- Geometric discrepancy: 0.0446
- The information below is about HL_5J7L_155
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_88205.2
- Basepair signature
- cWW-cWS-tSW-F-F
- Number of instances in this motif group
- 7
Unit IDs
7N2V|1|23|U|744
7N2V|1|23|1MG|745
7N2V|1|23|PSU|746
7N2V|1|23|5MU|747
7N2V|1|23|G|748
7N2V|1|23|A|749
7N2V|1|23|A|750
7N2V|1|23|A|751
7N2V|1|23|A|752
7N2V|1|23|A|753
Current chains
- Chain 23
- 23S rRNA
Nearby chains
- Chain LC
- 50S ribosomal protein L3
- Chain LV
- 50S ribosomal protein L22
- Chain Lf
- 50S ribosomal protein L32
- Chain Lh
- 50S ribosomal protein L34
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