HL_7NAC_009

3D structure

PDB id

7NAC (explore in PDB, NAKB, or RNA 3D Hub)

Description

State E2 nucleolar 60S ribosomal biogenesis intermediate - Composite model

Experimental method

ELECTRON MICROSCOPY

Resolution

3.04 Å

Loop

Sequence

GUUC

Length

4 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NAC_009 not in the Motif Atlas

Geometric match to HL_2CZJ_007

Geometric discrepancy: 0.3837

The information below is about HL_2CZJ_007

Detailed Annotation

UNCG variation

Broad Annotation

UNCG variation

Motif group

HL_23696.2

Basepair signature

cWW-F-F

Number of instances in this motif group

8

Unit IDs

7NAC|1|1|G|304
7NAC|1|1|U|305
7NAC|1|1|U|310
7NAC|1|1|C|311

Current chains

Chain 1

25S rRNA

Nearby chains

Chain A

Ribosome biogenesis protein BRX1

Chain N

60S ribosomal protein L15-A