HL_7NAC_025
3D structure
- PDB id
- 7NAC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- State E2 nucleolar 60S ribosomal biogenesis intermediate - Composite model
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.04 Å
Loop
- Sequence
- GGUAAGC
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7NAC_025 not in the Motif Atlas
- Geometric match to HL_4V9F_039
- Geometric discrepancy: 0.2827
- The information below is about HL_4V9F_039
- Detailed Annotation
- Other HL
- Broad Annotation
- Other HL
- Motif group
- HL_67772.1
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 13
Unit IDs
7NAC|1|1|G|1126
7NAC|1|1|G|1127
7NAC|1|1|U|1128
7NAC|1|1|A|1129
7NAC|1|1|A|1130
7NAC|1|1|G|1131
7NAC|1|1|C|1132
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain J
- rRNA-processing protein EBP2
- Chain b
- Nucleolar GTP-binding protein 1
- Chain r
- Ribosome biogenesis protein NSA2
- Chain s
- Nuclear GTP-binding protein NUG1
Coloring options: