HL_7NAC_048
3D structure
- PDB id
- 7NAC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- State E2 nucleolar 60S ribosomal biogenesis intermediate - Composite model
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.04 Å
Loop
- Sequence
- GAU(OMU)(OMG)(PSU)UCACC
- Length
- 11 nucleotides
- Bulged bases
- 7NAC|1|1|C|2925
- QA status
- Modified nucleotides: OMU, OMG, PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7NAC_048 not in the Motif Atlas
- Geometric match to HL_6ORD_035
- Geometric discrepancy: 0.3872
- The information below is about HL_6ORD_035
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_07951.1
- Basepair signature
- cWW-F-F
- Number of instances in this motif group
- 4
Unit IDs
7NAC|1|1|G|2918
7NAC|1|1|A|2919
7NAC|1|1|U|2920
7NAC|1|1|OMU|2921
7NAC|1|1|OMG|2922
7NAC|1|1|PSU|2923
7NAC|1|1|U|2924
7NAC|1|1|C|2925
7NAC|1|1|A|2926
7NAC|1|1|C|2927
7NAC|1|1|C|2928
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain V
- 60S ribosomal protein L23-A
- Chain b
- Nucleolar GTP-binding protein 1
- Chain w
- 27S pre-rRNA (guanosine(2922)-2'-O)-methyltransferase
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