HL_7NAU_015

3D structure

PDB id

7NAU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacterial 30S ribosomal subunit assembly complex state C (Consensus Refinement)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.78 Å

Loop

Sequence

CGGUGAAAUG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NAU_015 not in the Motif Atlas

Homologous match to HL_4LFB_015

Geometric discrepancy: 0.1638

The information below is about HL_4LFB_015

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75293.5

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

11

Unit IDs

7NAU|1|A|C|689
7NAU|1|A|G|690
7NAU|1|A|G|691
7NAU|1|A|U|692
7NAU|1|A|G|693
7NAU|1|A|A|694
7NAU|1|A|A|695
7NAU|1|A|A|696
7NAU|1|A|U|697
7NAU|1|A|G|698

Current chains

Chain A

16S rRNA

Nearby chains

Chain K

30S ribosomal protein S11