HL_7NAW_015

3D structure

PDB id

7NAW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacterial 30S ribosomal subunit assembly complex state B (Consensus Refinement)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.05 Å

Loop

Sequence

CGGUGAAAUG

Length

10 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NAW_015 not in the Motif Atlas

Homologous match to HL_6CZR_086

Geometric discrepancy: 0.1834

The information below is about HL_6CZR_086

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75293.4

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

13

Unit IDs

7NAW|1|A|C|689
7NAW|1|A|G|690
7NAW|1|A|G|691
7NAW|1|A|U|692
7NAW|1|A|G|693
7NAW|1|A|A|694
7NAW|1|A|A|695
7NAW|1|A|A|696
7NAW|1|A|U|697
7NAW|1|A|G|698

Current chains

Chain A

16S rRNA

Nearby chains

Chain K

Small ribosomal subunit protein uS11

Chain U

Small ribosomal subunit protein bS21