HL_7NHK_012

3D structure

PDB id

7NHK (explore in PDB, NAKB, or RNA 3D Hub)

Description

LsaA, an antibiotic resistance ABCF, in complex with 70S ribosome from Enterococcus faecalis

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

ACACGAGAAAU

Length

11 nucleotides

Bulged bases

7NHK|1|A|G|425

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NHK_012 not in the Motif Atlas

Homologous match to HL_5J7L_145

Geometric discrepancy: 0.1481

The information below is about HL_5J7L_145

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91503.7

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

7NHK|1|A|A|421
7NHK|1|A|C|422
7NHK|1|A|A|423
7NHK|1|A|C|424
7NHK|1|A|G|425
7NHK|1|A|A|426
7NHK|1|A|G|427
7NHK|1|A|A|428
7NHK|1|A|A|429
7NHK|1|A|A|430
7NHK|1|A|U|431

Current chains

Chain A

23S rRNA

Nearby chains

Chain Z

50S ribosomal protein L28