HL_7NHK_041

3D structure

PDB id

7NHK (explore in PDB, NAKB, or RNA 3D Hub)

Description

LsaA, an antibiotic resistance ABCF, in complex with 70S ribosome from Enterococcus faecalis

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

AGAGUAU

Length

7 nucleotides

Bulged bases

7NHK|1|A|U|1676

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NHK_041 not in the Motif Atlas

Homologous match to HL_5J7L_174

Geometric discrepancy: 0.1438

The information below is about HL_5J7L_174

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

7NHK|1|A|A|1672
7NHK|1|A|G|1673
7NHK|1|A|A|1674
7NHK|1|A|G|1675
7NHK|1|A|U|1676
7NHK|1|A|A|1677
7NHK|1|A|U|1678

Current chains

Chain A

23S rRNA

Nearby chains