HL_7NHM_005
3D structure
- PDB id
- 7NHM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome from Staphylococcus aureus
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UGAAUACAUAG
- Length
- 11 nucleotides
- Bulged bases (A, C, G, U)
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7NHM_005 not in the Motif Atlas
- Homologous match to HL_5J7L_138
- Geometric discrepancy: 0.2808
- The information below is about HL_5J7L_138
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_81820.1
- Basepair signature
- cWW-tSH-tHW-tHW-cSH-F
- Number of instances in this motif group
- 1
Unit IDs
7NHM|1|A|U|159
7NHM|1|A|G|160
7NHM|1|A|A|161
7NHM|1|A|A|162
7NHM|1|A|U|163
7NHM|1|A|A|164
7NHM|1|A|C|165
7NHM|1|A|A|166
7NHM|1|A|U|167
7NHM|1|A|A|168
7NHM|1|A|G|169
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 1
- 50S ribosomal protein L28
Coloring options: