HL_7NQH_011
3D structure
- PDB id
- 7NQH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 55S mammalian mitochondrial ribosome with mtRF1a and P-site tRNAMet
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- GAUUAGAUACC
- Length
- 11 nucleotides
- Bulged bases
- 7NQH|1|AA|U|433
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7NQH_011 not in the Motif Atlas
- Homologous match to HL_5J7L_017
- Geometric discrepancy: 0.146
- The information below is about HL_5J7L_017
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75293.5
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 11
Unit IDs
7NQH|1|AA|G|426
7NQH|1|AA|A|427
7NQH|1|AA|U|428
7NQH|1|AA|U|429
7NQH|1|AA|A|430
7NQH|1|AA|G|431
7NQH|1|AA|A|432
7NQH|1|AA|U|433
7NQH|1|AA|A|434
7NQH|1|AA|C|435
7NQH|1|AA|C|436
Current chains
- Chain AA
- 12S rRNA
Nearby chains
- Chain AG
- 28S ribosomal protein S7, mitochondrial
- Chain AK
- uS11m
- Chain AU
- bS21m
- Chain AV
- tRNAMet
- Chain AX
- mRNA
- Chain BA
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: