HL_7NQH_033

3D structure

PDB id

7NQH (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with mtRF1a and P-site tRNAMet

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

UGUGGCAAAA

Length

10 nucleotides

Bulged bases

7NQH|1|BA|G|294, 7NQH|1|BA|A|298

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NQH_033 not in the Motif Atlas

Homologous match to HL_7RQB_023

Geometric discrepancy: 0.1694

The information below is about HL_7RQB_023

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_39334.6

Basepair signature

cWW-cWS-tSW-F-F

Number of instances in this motif group

6

Unit IDs

7NQH|1|BA|U|291
7NQH|1|BA|G|292
7NQH|1|BA|U|293
7NQH|1|BA|G|294
7NQH|1|BA|G|295
7NQH|1|BA|C|296
7NQH|1|BA|A|297
7NQH|1|BA|A|298
7NQH|1|BA|A|299
7NQH|1|BA|A|300

Current chains

Chain BA

16S rRNA

Nearby chains

Chain B7

Mitochondrial ribosomal protein L34

Chain BE

ICT1

Chain BW

uL22m

Chain Bi

Mitochondrial ribosomal protein L45