HL_7NQH_059

3D structure

PDB id

7NQH (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with mtRF1a and P-site tRNAMet

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

UGCAACCG

Length

8 nucleotides

Bulged bases

7NQH|1|BA|G|1352

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NQH_059 not in the Motif Atlas

Homologous match to HL_7A0S_060

Geometric discrepancy: 0.1913

The information below is about HL_7A0S_060

Detailed Annotation

GNRA variation

Broad Annotation

GNRA variation

Motif group

HL_46665.2

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

11

Unit IDs

7NQH|1|BA|U|1351
7NQH|1|BA|G|1352
7NQH|1|BA|C|1353
7NQH|1|BA|A|1354
7NQH|1|BA|A|1355
7NQH|1|BA|C|1356
7NQH|1|BA|C|1357
7NQH|1|BA|G|1358

Current chains

Chain BA

16S rRNA

Nearby chains

Chain B9

Ribosomal protein