HL_7NQL_009
3D structure
- PDB id
- 7NQL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 55S mammalian mitochondrial ribosome with ICT1 and P site tRNAMet
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- CUGUAAAAAG
- Length
- 10 nucleotides
- Bulged bases
- 7NQL|1|AA|U|345
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7NQL_009 not in the Motif Atlas
- Homologous match to HL_4LFB_015
- Geometric discrepancy: 0.2127
- The information below is about HL_4LFB_015
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_38491.2
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 12
Unit IDs
7NQL|1|AA|C|342
7NQL|1|AA|U|343
7NQL|1|AA|G|344
7NQL|1|AA|U|345
7NQL|1|AA|A|346
7NQL|1|AA|A|347
7NQL|1|AA|A|348
7NQL|1|AA|A|349
7NQL|1|AA|A|350
7NQL|1|AA|G|351
Current chains
- Chain AA
- 12S rRNA
Nearby chains
- Chain AG
- Mitochondrial ribosomal protein S7
- Chain AK
- uS11m
- Chain AU
- bS21m
- Chain AX
- mRNA
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