HL_7NQL_050

3D structure

PDB id

7NQL (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with ICT1 and P site tRNAMet

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

UCCAAAUAA

Length

9 nucleotides

Bulged bases

7NQL|1|BA|U|950

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NQL_050 not in the Motif Atlas

Homologous match to HL_7A0S_048

Geometric discrepancy: 0.2627

The information below is about HL_7A0S_048

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_61418.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

12

Unit IDs

7NQL|1|BA|U|944
7NQL|1|BA|C|945
7NQL|1|BA|C|946
7NQL|1|BA|A|947
7NQL|1|BA|A|948
7NQL|1|BA|A|949
7NQL|1|BA|U|950
7NQL|1|BA|A|951
7NQL|1|BA|A|952

Current chains

Chain BA

16S rRNA

Nearby chains

Chain AA

Small subunit ribosomal RNA; SSU rRNA

Chain BL

Peptidyl-tRNA hydrolase ICT1, mitochondrial

Chain BO

uL14m