HL_7NRC_008
3D structure
- PDB id
- 7NRC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the yeast Gcn1 bound to a leading stalled 80S ribosome with Rbg2, Gir2, A- and P-tRNA and eIF5A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- UUUGGGAAUG
- Length
- 10 nucleotides
- Bulged bases
- 7NRC|1|LA|A|284, 7NRC|1|LA|A|285
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7NRC_008 not in the Motif Atlas
- Homologous match to HL_5TBW_008
- Geometric discrepancy: 0.0849
- The information below is about HL_5TBW_008
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_77436.2
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 23
Unit IDs
7NRC|1|LA|U|278
7NRC|1|LA|U|279
7NRC|1|LA|U|280
7NRC|1|LA|G|281
7NRC|1|LA|G|282
7NRC|1|LA|G|283
7NRC|1|LA|A|284
7NRC|1|LA|A|285
7NRC|1|LA|U|286
7NRC|1|LA|G|287
Current chains
- Chain LA
- 25S rRNA (3184-MER)
Nearby chains
- Chain LN
- 60S ribosomal protein L13-A
- Chain LP
- 60S ribosomal protein L15-A
- Chain LS
- 60S ribosomal protein L18-A
- Chain Lc
- 60S ribosomal protein L28
- Chain Lq
- 60S ribosomal protein L42-A
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