HL_7NRC_083
3D structure
- PDB id
- 7NRC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the yeast Gcn1 bound to a leading stalled 80S ribosome with Rbg2, Gir2, A- and P-tRNA and eIF5A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GAUGAUUC
- Length
- 8 nucleotides
- Bulged bases
- 7NRC|1|S2|U|249
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7NRC_083 not in the Motif Atlas
- Homologous match to HL_4V88_191
- Geometric discrepancy: 0.1658
- The information below is about HL_4V88_191
- Detailed Annotation
- T-loop with 1 bulged base
- Broad Annotation
- T-loop
- Motif group
- HL_77436.2
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 23
Unit IDs
7NRC|1|S2|G|243
7NRC|1|S2|A|244
7NRC|1|S2|U|245
7NRC|1|S2|G|246
7NRC|1|S2|A|247
7NRC|1|S2|U|248
7NRC|1|S2|U|249
7NRC|1|S2|C|250
Current chains
- Chain S2
- 18S rRNA (1771-MER)
Nearby chains
- Chain SS
- 40S ribosomal protein S4-A
- Chain SX
- 40S ribosomal protein S11-A
Coloring options: