HL_7NSO_016

3D structure

PDB id

7NSO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with P-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

ACACGUGGUAU

Length

11 nucleotides

Bulged bases

7NSO|1|A|G|386, 7NSO|1|A|G|389

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NSO_016 not in the Motif Atlas

Homologous match to HL_5J7L_145

Geometric discrepancy: 0.1351

The information below is about HL_5J7L_145

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91503.7

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

7NSO|1|A|A|382
7NSO|1|A|C|383
7NSO|1|A|A|384
7NSO|1|A|C|385
7NSO|1|A|G|386
7NSO|1|A|U|387
7NSO|1|A|G|388
7NSO|1|A|G|389
7NSO|1|A|U|390
7NSO|1|A|A|391
7NSO|1|A|U|392

Current chains

Chain A

23S rRNA (2903-MER)

Nearby chains

Chain X

50S ribosomal protein L28