HL_7NWG_001
3D structure
- PDB id
- 7NWG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GGGUUCAAGUC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7NWG_001 not in the Motif Atlas
- Geometric match to HL_4V7M_040
- Geometric discrepancy: 0.3278
- The information below is about HL_4V7M_040
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_67079.1
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
7NWG|1|33|G|51
7NWG|1|33|G|52
7NWG|1|33|G|53
7NWG|1|33|U|54
7NWG|1|33|U|55
7NWG|1|33|C|56
7NWG|1|33|A|57
7NWG|1|33|A|58
7NWG|1|33|G|59
7NWG|1|33|U|60
7NWG|1|33|C|61
Current chains
- Chain 33
- P/E-Site tRNA
Nearby chains
- Chain 51
- Large subunit ribosomal RNA; LSU rRNA
- Chain o3
- eL42
- Chain w3
- Ribosomal protein
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